PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.LC4KN
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 264aa    MW: 29491.4 Da    PI: 6.885
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.LC4KNgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH37.63.8e-1278123555
                  HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  h ++Er RR++i + f  L  l+P +     kK++Ka++L  A++Y+k+Lq
  Araip.LC4KN  78 HIIAERMRREKISQQFIALSALIPGL-----KKMDKATVLGDAIKYVKQLQ 123
                  899***********************.....9******************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088814.58973122IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474595.76E-1777139IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.15E-1178127No hitNo description
PfamPF000101.1E-978123IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.108.9E-1778135IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003534.7E-1479128IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 264 aa     Download sequence    Send to blast
MISTEESWTT WLCDLEEEDY SFINGIIADP NNYSNSQMSN NDNERPSKLL KSTTPTPTRR  60
RRTGSAGTGR SPQHAHDHII AERMRREKIS QQFIALSALI PGLKKMDKAT VLGDAIKYVK  120
QLQEQVKVLE TESKRKSAES VVYVEKSEVC GEEDVSDTWS NSGGDGNSSY EVSKAVSRSV  180
LPEVEARVSE KNVLIRIHCE KHKGVLMHIL KLIDKLHLSV LNTTSLPFGT SIVDITVTAE  240
MDDKFSLSAK ELARNIRVGL LQSM
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016201563.10.0PREDICTED: transcription factor NAI1-like
TrEMBLK7K4T33e-91K7K4T3_SOYBN; Uncharacterized protein
STRINGGLYMA01G40611.18e-91(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF45534164
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22760.18e-50bHLH family protein